3,177 research outputs found

    Magnetic Flux Tube Reconnection: Tunneling Versus Slingshot

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    The discrete nature of the solar magnetic field as it emerges into the corona through the photosphere indicates that it exists as isolated flux tubes in the convection zone, and will remain as discrete flux tubes in the corona until it collides and reconnects with other coronal fields. Collisions of these flux tubes will in general be three dimensional, and will often lead to reconnection, both rearranging the magnetic field topology in fundamental ways, and releasing magnetic energy. With the goal of better understanding these dynamics, we carry out a set of numerical experiments exploring fundamental characteristics of three dimensional magnetic flux tube reconnection. We first show that reconnecting flux tubes at opposite extremes of twist behave very differently: in some configurations, low twist tubes slingshot while high twist tubes tunnel. We then discuss a theory explaining these differences: by assuming helicity conservation during the reconnection one can show that at high twist, tunneled tubes reach a lower magnetic energy state than slingshot tubes, whereas at low twist the opposite holds. We test three predictions made by this theory. 1) We find that the level of twist at which the transition from slingshot to tunnel occurs is about two to three times higher than predicted on the basis of energetics and helicity conservation alone, probably because the dynamics of the reconnection play a large role as well. 2) We find that the tunnel occurs at all flux tube collision angles predicted by the theory. 3) We find that the amount of magnetic energy a slingshot or a tunnel reconnection releases agrees reasonably well with the theory, though at the high resistivities we have to use for numerical stability, a significant amount of magnetic energy is lost to diffusion, independent of reconnection.Comment: 21 pages, 15 figures, submitted to Ap

    The rise and emergence of untwisted toroidal flux ropes on the sun

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    Magnetic flux ropes (MFRs) rising buoyantly through the Sun's convection zone are thought to be subject to viscous forces preventing them from rising coherently. Numerous studies have suggested that MFRs require a minimum twist in order to remain coherent during their rise. Furthermore, even MFRs that get to the photosphere may be unable to successfully emerge into the corona unless they are at least moderately twisted, since the magnetic pressure gradient needs to overcome the weight of the photospheric plasma. To date, however, no lower limit has been placed on the critical minimum twist required for an MFR to rise coherently through the convection zone or emerge through the photosphere. In this paper, we simulate an untwisted toroidal MFR that is able to rise from the convection zone and emerge through the photosphere as an active region that resembles those observed on the Sun. We show that untwisted MFRs can remain coherent during their rise and then pile up near the photosphere, triggering undular instability, allowing the MFR to emerge through the photosphere. We propose that the toroidal geometry of our MFR is critical for its coherent rise. Upon emergence, a pair of lobes rises into the corona. The two lobes then interact and reconnect, resulting in a localized high speed jet. The resulting photospheric magnetogram displays the characteristic salt-and-pepper structure often seen in observations. Our major result is that MFRs need not be twisted to rise coherently through the convection zone and emerge through the photosphere. © 2021. The American Astronomical Society. All rights reserved

    The Power of Light Zine 2 - Why does life exist? - an epistemically insightful way to explore the nature of science and research at Diamond Light Source, UK

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    In the STFC funded Epistemic Insight Initiative project, The Power of Light, a series of resources have been designed informed by co-creation activities, pilot lessons, and workshops that involved children in schools and with their families in community spaces. Through this project with Diamond, we brought into classrooms and community spaces how light can be used to help investigate the world around us, address real-world problems and inform our thinking about Big Questions. The resources we develop support teachers' and their students' sense of agency when exploring 'how knowledge works' and how knowledge is built through different disciplines (including the natural sciences, the arts, and the humanities). This 'zine', with its focus on how scientists have been working with paleotonologists to investigate evidence, found inside the fossilised leg of a thescelosaurus, of the cataclysmic event that led to the extinction of dinosaurs. Zine 2 'Why does life exist?' has been developed through co-creative activities involving research scientists at Diamond Light Source (UK), academics, primary school teachers, STEM ambassadors, and Diamond's public engagement team. Zines use an appealing combination of text and images to create a concise comic-like narrative format to generate enthusiasm about a particular area of interest - the series of zines designed for this project focuses on research taking place at the Diamond facility. The Diamond Light Source facility houses a synchrotron which is used to conduct research in a variety of applied fields of science and technology. This zine is designed to be accessible to ages 8+, and works well with a short animation (available in both Zenodo and on the Epistemic Insight You Tube channel) that has been created with additional funding from STFC. Teaching notes are available for this zine, with guidance and activity sheets to support working with the Power of Light resources. This zine explores these discussion questions: 1) What is needed for living things to exist on Earth? 2) What helps us to learn more about past events? 3) What enables us to be able say we 'know' something

    Development of real-time PCR and hybridization methods for detection and identification of thermophilic Campylobacter spp. in pig faecal samples

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    Aims: To develop a real-time (rt) PCR for species differentiation of thermophilic Campylobacter and to develop a method for assessing co-colonization of pigs by Campylobacter spp. Methods and results: The specificity of a developed 5’nuclease rt-PCR for species-specific identification of C. jejuni, C. coli, C. lari, C. upsaliensis and of a hipO gene nucleotide probe for detection of C. jejuni by colony-blot hybridization were determined by testing a total of 75 reference strains of Campylobacter spp. and related organisms. The rt-PCR method allowed species-specific detection of Campylobacter spp. in naturally infected pig faecal samples after an enrichment step, whereas the hybridization approach enhanced the specific isolation of C. jejuni (present in minority to C. coli) from pigs. Conclusions: The rt-PCR was specific for Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis and the colony-blot hybridization approach provided an effective tool for isolation of C. jejuni from pig faecal samples typically dominated by C. coli. Significance and impact of study: Species differentiation between thermophilic Campylobacter is difficult by phenotypic methods and the developed rt-PCR provides an easy and fast method for such differentiation. Detection of C. jejuni by colony hybridization may increase the isolation rate of this species from pig feces

    20 and 3D Numerical Simulations of Flux Cancellation

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    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta= 1 level (Le., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a lOW-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading

    Quinine-resistant malaria

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    A Linear Programming Approach to Weak Reversibility and Linear Conjugacy of Chemical Reaction Networks

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    15 páginas, 2 figuras.-- The final publication is available at www.springerlink.comA numerically effective procedure for determining weakly reversible chemical reaction networks that are linearly conjugate to a known reaction network is proposed in this paper. The method is based on translating the structural and algebraic characteristics of weak reversibility to logical statements and solving the obtained set of linear (in)equalities in the framework of mixed integer linear programming. The unknowns in the problem are the reaction rate coefficients and the parameters of the linear conjugacy transformation. The efficacy of the approach is shown through numerical examples.Matthew D. Johnston and David Siegel acknowledge the support of D. Siegel’s Natural Sciences and Engineering Research Council of Canada Discovery Grant. Gàbor Szederkényi acknowledges the support of the Hungarian National Research Fund through grant no. OTKA K-83440 as well as the support of project CAFE (Computer Aided Process for Food Engineering) FP7-KBBE-2007-1 (Grant no: 212754).Peer reviewe
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